WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27H5.7b.1 Sequence Name  C27H5.7b.1
Length (nt)  1763   Chromosome Location  II: 7168828-7171304
Chromosome . Primary Identifier  II Chromosome Location . Start  7168828
Chromosome Location . End  7171304 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27H5.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001129 dyf-13 C27H5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27H5.7b C27H5.7b 1659   II: 7168828-7168954

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27H5.7b.1 7168828 7171304 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56080   127   II: 7168828-7168954 Caenorhabditis elegans
Exon56082   134   II: 7169006-7169139 Caenorhabditis elegans
Exon56084   107   II: 7169187-7169293 Caenorhabditis elegans
Exon56086   240   II: 7169339-7169578 Caenorhabditis elegans
Exon56088   64   II: 7169691-7169754 Caenorhabditis elegans
Exon56090   110   II: 7169804-7169913 Caenorhabditis elegans
Exon56092   398   II: 7169959-7170356 Caenorhabditis elegans
Exon56094   101   II: 7170413-7170513 Caenorhabditis elegans
Exon56096   187   II: 7170685-7170871 Caenorhabditis elegans
Exon56098   128   II: 7170921-7171048 Caenorhabditis elegans
Exon56100   126   II: 7171093-7171218 Caenorhabditis elegans
Exon56101   41   II: 7171264-7171304 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27H5.7b.1 7168828 7171304 -1

1 Sequence

Length
1763

1 Sequence Ontology Term

Identifier Name Description
transcript