WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A5.3.1 Sequence Name  F32A5.3.1
Length (nt)  1811   Chromosome Location  II: 7232853-7235920
Chromosome . Primary Identifier  II Chromosome Location . Start  7232853
Chromosome Location . End  7235920 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017969 ctsa-3.1 F32A5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A5.3 F32A5.3 1725   II: 7232854-7233020

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A5.3.1 7232853 7235920 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56443   168   II: 7232853-7233020 Caenorhabditis elegans
Exon56444   163   II: 7233540-7233702 Caenorhabditis elegans
Exon56445   137   II: 7234161-7234297 Caenorhabditis elegans
Exon56446   139   II: 7234348-7234486 Caenorhabditis elegans
Exon56447   92   II: 7234529-7234620 Caenorhabditis elegans
Exon56448   168   II: 7234675-7234842 Caenorhabditis elegans
Exon56449   184   II: 7234884-7235067 Caenorhabditis elegans
Exon56450   339   II: 7235116-7235454 Caenorhabditis elegans
Exon56451   421   II: 7235500-7235920 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A5.3.1 7232853 7235920 1

1 Sequence

Length
1811

1 Sequence Ontology Term

Identifier Name Description
transcript