WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43E2.3b.1 Sequence Name  F43E2.3b.1
Length (nt)  2148   Chromosome Location  II: 7358913-7363174
Chromosome . Primary Identifier  II Chromosome Location . Start  7358913
Chromosome Location . End  7363174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43E2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018392 insc-1 F43E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43E2.3b F43E2.3b 2148   II: 7358913-7358987

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3b.1 7358913 7363174 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56776   75   II: 7358913-7358987 Caenorhabditis elegans
Exon56778   170   II: 7359199-7359368 Caenorhabditis elegans
Exon56783   98   II: 7359954-7360051 Caenorhabditis elegans
Exon56787   111   II: 7360097-7360207 Caenorhabditis elegans
Exon56791   41   II: 7360587-7360627 Caenorhabditis elegans
Exon56795   145   II: 7360741-7360885 Caenorhabditis elegans
Exon56799   115   II: 7360938-7361052 Caenorhabditis elegans
Exon56803   191   II: 7361105-7361295 Caenorhabditis elegans
Exon56807   95   II: 7361343-7361437 Caenorhabditis elegans
Exon56811   101   II: 7361483-7361583 Caenorhabditis elegans
Exon56815   100   II: 7361632-7361731 Caenorhabditis elegans
Exon56819   246   II: 7361783-7362028 Caenorhabditis elegans
Exon56823   154   II: 7362110-7362263 Caenorhabditis elegans
Exon56827   103   II: 7362311-7362413 Caenorhabditis elegans
Exon56831   281   II: 7362724-7363004 Caenorhabditis elegans
Exon56832   122   II: 7363053-7363174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43E2.3b.1 7358913 7363174 1

1 Sequence

Length
2148

1 Sequence Ontology Term

Identifier Name Description
transcript