WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07D10.3.1 Sequence Name  C07D10.3.1
Length (nt)  1176   Chromosome Location  II: 7385742-7389139
Chromosome . Primary Identifier  II Chromosome Location . Start  7385742
Chromosome Location . End  7389139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07D10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015568 sre-3 C07D10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07D10.3 C07D10.3 981   II: 7387162-7387265

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07D10.3.1 7385742 7389139 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56892   60   II: 7385742-7385801 Caenorhabditis elegans
Exon56893   116   II: 7387150-7387265 Caenorhabditis elegans
Exon56894   164   II: 7387310-7387473 Caenorhabditis elegans
Exon56895   45   II: 7387518-7387562 Caenorhabditis elegans
Exon56896   153   II: 7387678-7387830 Caenorhabditis elegans
Exon56897   185   II: 7387879-7388063 Caenorhabditis elegans
Exon56898   134   II: 7388107-7388240 Caenorhabditis elegans
Exon56899   79   II: 7388777-7388855 Caenorhabditis elegans
Exon56900   240   II: 7388900-7389139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07D10.3.1 7385742 7389139 1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
transcript