WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1022.6.1 Sequence Name  D1022.6.1
Length (nt)  1264   Chromosome Location  II: 7460026-7465619
Chromosome . Primary Identifier  II Chromosome Location . Start  7460026
Chromosome Location . End  7465619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1022.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005641 sro-1 D1022.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1022.6 D1022.6 1143   II: 7460110-7460277

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1022.6.1 7460026 7465619 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57018   252   II: 7460026-7460277 Caenorhabditis elegans
Exon57019   757   II: 7460771-7461527 Caenorhabditis elegans
Exon57021   99   II: 7461950-7462048 Caenorhabditis elegans
Exon57022   79   II: 7462597-7462675 Caenorhabditis elegans
Exon57025   77   II: 7465543-7465619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1022.6.1 7460026 7465619 -1

1 Sequence

Length
1264

1 Sequence Ontology Term

Identifier Name Description
transcript