WormMine: Gene WBGene00271809

• WormBase Gene ID: WBGene00271809
• Gene Name: D1022.17
• Sequence Name: D1022.17
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in AVM; PHCL; PVM; and RIPL based on single-cell RNA-seq studies. Is affected by several genes including spr-5; unc-30; and ilc-17.1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 932

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00271809

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:D1022.17	D1022.17	385	II: 7471624-7472555

Other

0 CDSs

0 RNAi Result

24 Allele

• gk963801
• gk963053
• gk962682
• WBVar02122920
• WBVar02122921
• gk695310
• gk601121
• gk545974
• gk863221
• gk318148
• gk782218
• gk411583
• gk916273
• WBVar01826595
• gk146952
• gk146951
• gk146954
• gk146953
• WBVar00551410
• gk146955
• WBVar00173422
• WBVar00225777
• WBVar01307911
• WBVar01307909

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00271809
• Start: 7471624
• End: 7472555
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrII_7472556..7472728
• Length (nt): 173
• Chromosome Location: II: 7472556-7472728
• Organism: Caenorhabditis elegans

5 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066594:ilc-17.1(syb5296)_upregulated
	Transcripts that showed significantly decreased expression in unc-30(ok613) animals at L4 larva stage, comparing to N2 animals.	Genes exhibiting at least two-fold change were considered differentially expressed.	WBPaper00061439:unc-30(ok613)_downregulated
	Transcripts that showed significantly increased expression in spr-5(by101);met-2(n4256) L1 animals comparing to in N2 control.	DeSeq2 (v.2.11.40.2), p < 0.05.	WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
Temperature Shift: 25C vs 15C for 16 hours at L4 larva stage.	Transcripts that showed significantly decreased expression in AFD neurons at lin-15(n765ts); oyIs95 animals shifted from 20C to 25C for 16 hours at L4 larva stage, comparing to animals shifted from 20C to 15C for 16 hours at L4 larva stage.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00065158:25C_vs_15C_downregulated_AFD
	Single-cell RNA-Seq cell group 20_1 expressed in neuron.	scVI 0.6.0	WBPaper00065841:20_1

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00271809
• Start: 7471624
• End: 7472555
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 932

1 Sequence Ontology Term