WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10H1.2.1 Sequence Name  R10H1.2.1
Length (nt)  1273   Chromosome Location  II: 7497284-7499490
Chromosome . Primary Identifier  II Chromosome Location . Start  7497284
Chromosome Location . End  7499490 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10H1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019999 srab-14 R10H1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10H1.2 R10H1.2 1170   II: 7497372-7497537

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10H1.2.1 7497284 7499490 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57128   254   II: 7497284-7497537 Caenorhabditis elegans
Exon57129   132   II: 7497580-7497711 Caenorhabditis elegans
Exon57130   104   II: 7497754-7497857 Caenorhabditis elegans
Exon57131   86   II: 7497903-7497988 Caenorhabditis elegans
Exon57132   205   II: 7498201-7498405 Caenorhabditis elegans
Exon57133   169   II: 7498454-7498622 Caenorhabditis elegans
Exon57134   182   II: 7498669-7498850 Caenorhabditis elegans
Exon57135   90   II: 7499083-7499172 Caenorhabditis elegans
Exon57136   51   II: 7499440-7499490 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10H1.2.1 7497284 7499490 -1

1 Sequence

Length
1273

1 Sequence Ontology Term

Identifier Name Description
transcript