WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1290.6.1 Sequence Name  ZK1290.6.1
Length (nt)  1615   Chromosome Location  II: 7525738-7528239
Chromosome . Primary Identifier  II Chromosome Location . Start  7525738
Chromosome Location . End  7528239 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1290.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022888 rnh-1.1 ZK1290.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1290.6 ZK1290.6 1524   II: 7525765-7525834

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1290.6.1 7525738 7528239 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57217   97   II: 7525738-7525834 Caenorhabditis elegans
Exon57218   32   II: 7525876-7525907 Caenorhabditis elegans
Exon57219   43   II: 7525955-7525997 Caenorhabditis elegans
Exon57220   159   II: 7526047-7526205 Caenorhabditis elegans
Exon57221   66   II: 7526320-7526385 Caenorhabditis elegans
Exon57222   201   II: 7526430-7526630 Caenorhabditis elegans
Exon57223   48   II: 7526684-7526731 Caenorhabditis elegans
Exon57224   87   II: 7526774-7526860 Caenorhabditis elegans
Exon57225   57   II: 7526905-7526961 Caenorhabditis elegans
Exon57226   42   II: 7527005-7527046 Caenorhabditis elegans
Exon57227   65   II: 7527097-7527161 Caenorhabditis elegans
Exon57228   114   II: 7527208-7527321 Caenorhabditis elegans
Exon57229   182   II: 7527366-7527547 Caenorhabditis elegans
Exon57230   72   II: 7527684-7527755 Caenorhabditis elegans
Exon57231   106   II: 7527800-7527905 Caenorhabditis elegans
Exon57232   100   II: 7527954-7528053 Caenorhabditis elegans
Exon57233   144   II: 7528096-7528239 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1290.6.1 7525738 7528239 1

1 Sequence

Length
1615

1 Sequence Ontology Term

Identifier Name Description
transcript