WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35D2.5c.2 Sequence Name  F35D2.5c.2
Length (nt)  3126   Chromosome Location  II: 7585696-7591886
Chromosome . Primary Identifier  II Chromosome Location . Start  7585696
Chromosome Location . End  7591886 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35D2.5c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006363 syd-1 F35D2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35D2.5c F35D2.5c 2166   II: 7586080-7586162

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35D2.5c.2 7585696 7591886 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57434   467   II: 7585696-7586162 Caenorhabditis elegans
Exon57438   151   II: 7586704-7586854 Caenorhabditis elegans
Exon57441   356   II: 7586902-7587257 Caenorhabditis elegans
Exon57444   436   II: 7587325-7587760 Caenorhabditis elegans
Exon57447   479   II: 7587814-7588292 Caenorhabditis elegans
Exon57450   123   II: 7588587-7588709 Caenorhabditis elegans
Exon57453   268   II: 7588758-7589025 Caenorhabditis elegans
Exon57456   118   II: 7589177-7589294 Caenorhabditis elegans
Exon57459   155   II: 7589410-7589564 Caenorhabditis elegans
Exon57463   102   II: 7591134-7591235 Caenorhabditis elegans
Exon57465   79   II: 7591281-7591359 Caenorhabditis elegans
Exon57467   126   II: 7591402-7591527 Caenorhabditis elegans
Exon57469   150   II: 7591577-7591726 Caenorhabditis elegans
Exon57471   116   II: 7591771-7591886 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35D2.5c.2 7585696 7591886 -1

1 Sequence

Length
3126

1 Sequence Ontology Term

Identifier Name Description
transcript