WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F35D2.5a Sequence Name  F35D2.5a
Length (nt)  2964   Chromosome Location  II: 7586080-7586162
Chromosome . Primary Identifier  II Chromosome Location . Start  7586080
Chromosome Location . End  7586162
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35D2.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33391 SYD-1, isoform a 109.3 987 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00082910
WBRNAi00046330
WBRNAi00014326
WBRNAi00031774

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F35D2.5a 7586080 7586162 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006363 syd-1 F35D2.5 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F35D2.5a 7586080 7586162 -1
CDS:F35D2.5a 7586704 7586854 -1
CDS:F35D2.5a 7586902 7587257 -1
CDS:F35D2.5a 7587325 7587760 -1
CDS:F35D2.5a 7587814 7588292 -1
CDS:F35D2.5a 7588587 7588709 -1
CDS:F35D2.5a 7588758 7589025 -1
CDS:F35D2.5a 7589177 7589294 -1
CDS:F35D2.5a 7589410 7589564 -1
CDS:F35D2.5a 7591134 7591235 -1
CDS:F35D2.5a 7591281 7591359 -1
CDS:F35D2.5a 7591402 7591527 -1
CDS:F35D2.5a 7591577 7591726 -1
CDS:F35D2.5a 7591771 7591885 -1
CDS:F35D2.5a 7591982 7592024 -1
CDS:F35D2.5a 7594567 7594670 -1
CDS:F35D2.5a 7594833 7594908 -1

1 Sequence

Length
2964

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F35D2.5a.1 F35D2.5a.1 3351   II: 7585697-7594912