WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07G3.3d.1 Sequence Name  R07G3.3d.1
Length (nt)  6089   Chromosome Location  II: 7599659-7608013
Chromosome . Primary Identifier  II Chromosome Location . Start  7599659
Chromosome Location . End  7608013 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07G3.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019940 npp-21 R07G3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07G3.3d R07G3.3d 5913   II: 7599659-7599931

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07G3.3d.1 7599659 7608013 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57492   273   II: 7599659-7599931 Caenorhabditis elegans
Exon57497   201   II: 7599978-7600178 Caenorhabditis elegans
Exon57502   258   II: 7600222-7600479 Caenorhabditis elegans
Exon57507   708   II: 7600528-7601235 Caenorhabditis elegans
Exon57512   282   II: 7601289-7601570 Caenorhabditis elegans
Exon57517   443   II: 7601619-7602061 Caenorhabditis elegans
Exon57522   112   II: 7602106-7602217 Caenorhabditis elegans
Exon57527   461   II: 7602265-7602725 Caenorhabditis elegans
Exon57532   105   II: 7602770-7602874 Caenorhabditis elegans
Exon57537   499   II: 7602921-7603419 Caenorhabditis elegans
Exon57543   626   II: 7603469-7604094 Caenorhabditis elegans
Exon57547   49   II: 7604142-7604190 Caenorhabditis elegans
Exon57553   237   II: 7605572-7605808 Caenorhabditis elegans
Exon57557   214   II: 7605857-7606070 Caenorhabditis elegans
Exon57561   114   II: 7606116-7606229 Caenorhabditis elegans
Exon57563   266   II: 7606271-7606536 Caenorhabditis elegans
Exon57569   136   II: 7606590-7606725 Caenorhabditis elegans
Exon57573   159   II: 7606771-7606929 Caenorhabditis elegans
Exon57577   390   II: 7606976-7607365 Caenorhabditis elegans
Exon57581   229   II: 7607410-7607638 Caenorhabditis elegans
Exon57586   327   II: 7607687-7608013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07G3.3d.1 7599659 7608013 1

1 Sequence

Length
6089

1 Sequence Ontology Term

Identifier Name Description
transcript