WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07G3.3e Sequence Name  R07G3.3e
Length (nt)  5910   Chromosome Location  II: 7599659-7599931
Chromosome . Primary Identifier  II Chromosome Location . Start  7599659
Chromosome Location . End  7599931
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07G3.3e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53106 NPP-21, isoform e 222.1 1969 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00051500
WBRNAi00051501
WBRNAi00026058
WBRNAi00076603
WBRNAi00000197
WBRNAi00114622
WBRNAi00009048

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07G3.3e 7599659 7599931 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019940 npp-21 R07G3.3 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07G3.3e 7599659 7599931 1
CDS:R07G3.3e 7599978 7600178 1
CDS:R07G3.3e 7600222 7600479 1
CDS:R07G3.3e 7600528 7601235 1
CDS:R07G3.3e 7601289 7601570 1
CDS:R07G3.3e 7601619 7602061 1
CDS:R07G3.3e 7602106 7602217 1
CDS:R07G3.3e 7602265 7602725 1
CDS:R07G3.3e 7602770 7602874 1
CDS:R07G3.3e 7602921 7603419 1
CDS:R07G3.3e 7603469 7604094 1
CDS:R07G3.3e 7604142 7604190 1
CDS:R07G3.3e 7605572 7605808 1
CDS:R07G3.3e 7605857 7606070 1
CDS:R07G3.3e 7606116 7606229 1
CDS:R07G3.3e 7606280 7606542 1
CDS:R07G3.3e 7606590 7606725 1
CDS:R07G3.3e 7606771 7606929 1
CDS:R07G3.3e 7606976 7607365 1
CDS:R07G3.3e 7607410 7607638 1
CDS:R07G3.3e 7607687 7607837 1

1 Sequence

Length
5910

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07G3.3e.1 R07G3.3e.1 6086   II: 7599659-7608013