WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R153.1b.1 Sequence Name  R153.1b.1
Length (nt)  1881   Chromosome Location  II: 7628064-7649959
Chromosome . Primary Identifier  II Chromosome Location . Start  7628064
Chromosome Location . End  7649959 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R153.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020114 pde-4 R153.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R153.1b R153.1b 1881   II: 7628064-7628240

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R153.1b.1 7628064 7649959 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57633   177   II: 7628064-7628240 Caenorhabditis elegans
Exon57638   183   II: 7628352-7628534 Caenorhabditis elegans
Exon57646   123   II: 7628587-7628709 Caenorhabditis elegans
Exon57654   155   II: 7628928-7629082 Caenorhabditis elegans
Exon57662   100   II: 7629491-7629590 Caenorhabditis elegans
Exon57670   423   II: 7629642-7630064 Caenorhabditis elegans
Exon57678   141   II: 7630883-7631023 Caenorhabditis elegans
Exon57686   77   II: 7632258-7632334 Caenorhabditis elegans
Exon57694   103   II: 7632752-7632854 Caenorhabditis elegans
Exon57703   94   II: 7633705-7633798 Caenorhabditis elegans
Exon57713   177   II: 7641624-7641800 Caenorhabditis elegans
Exon57722   99   II: 7649789-7649887 Caenorhabditis elegans
Exon57727   29   II: 7649931-7649959 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R153.1b.1 7628064 7649959 -1

1 Sequence

Length
1881

1 Sequence Ontology Term

Identifier Name Description
transcript