WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F18A1.4a Sequence Name  F18A1.4a
Length (nt)  1647   Chromosome Location  II: 7668006-7668050
Chromosome . Primary Identifier  II Chromosome Location . Start  7668006
Chromosome Location . End  7668050
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A1.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27975 LIR-2, isoform a 61.8 548 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00044909
WBRNAi00013483
WBRNAi00030223
WBRNAi00062208
WBRNAi00107139
WBRNAi00062209

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F18A1.4a 7668006 7668050 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003045 lir-2 F18A1.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F18A1.4a 7668006 7668050 1
CDS:F18A1.4a 7668428 7668651 1
CDS:F18A1.4a 7668706 7668918 1
CDS:F18A1.4a 7668969 7669377 1
CDS:F18A1.4a 7669846 7669915 1
CDS:F18A1.4a 7670479 7670659 1
CDS:F18A1.4a 7670711 7671130 1
CDS:F18A1.4a 7671710 7671794 1

1 Sequence

Length
1647

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F18A1.4a.1 F18A1.4a.1 2501   II: 7667267-7671909