WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18A1.1.1 Sequence Name  F18A1.1.1
Length (nt)  3468   Chromosome Location  II: 7684889-7689689
Chromosome . Primary Identifier  II Chromosome Location . Start  7684889
Chromosome Location . End  7689689 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017545 F18A1.1 F18A1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18A1.1 F18A1.1 3297   II: 7685293-7685386

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18A1.1.1 7684889 7689689 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57865   70   II: 7684889-7684958 Caenorhabditis elegans
Exon57866   195   II: 7685192-7685386 Caenorhabditis elegans
Exon57867   172   II: 7685430-7685601 Caenorhabditis elegans
Exon57868   128   II: 7686030-7686157 Caenorhabditis elegans
Exon57869   429   II: 7686204-7686632 Caenorhabditis elegans
Exon57870   536   II: 7686892-7687427 Caenorhabditis elegans
Exon57871   504   II: 7687545-7688048 Caenorhabditis elegans
Exon57872   400   II: 7688211-7688610 Caenorhabditis elegans
Exon57873   1034   II: 7688656-7689689 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18A1.1.1 7684889 7689689 1

1 Sequence

Length
3468

1 Sequence Ontology Term

Identifier Name Description
transcript