WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0228.4d.1 Sequence Name  B0228.4d.1
Length (nt)  4503   Chromosome Location  II: 7724903-7731421
Chromosome . Primary Identifier  II Chromosome Location . Start  7724903
Chromosome Location . End  7731421 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0228.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015061 cpna-2 B0228.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0228.4d B0228.4d 4140   II: 7724903-7725349

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4d.1 7724903 7731421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58021   447   II: 7724903-7725349 Caenorhabditis elegans
Exon58028   449   II: 7725982-7726430 Caenorhabditis elegans
Exon58031   283   II: 7726582-7726864 Caenorhabditis elegans
Exon58034   124   II: 7727066-7727189 Caenorhabditis elegans
Exon58037   453   II: 7727237-7727689 Caenorhabditis elegans
Exon58040   89   II: 7727835-7727923 Caenorhabditis elegans
Exon58043   120   II: 7727969-7728088 Caenorhabditis elegans
Exon58046   69   II: 7728134-7728202 Caenorhabditis elegans
Exon58049   69   II: 7728251-7728319 Caenorhabditis elegans
Exon58052   1536   II: 7728366-7729901 Caenorhabditis elegans
Exon58055   133   II: 7730028-7730160 Caenorhabditis elegans
Exon58057   264   II: 7730506-7730769 Caenorhabditis elegans
Exon58058   467   II: 7730955-7731421 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4d.1 7724903 7731421 1

1 Sequence

Length
4503

1 Sequence Ontology Term

Identifier Name Description
transcript