WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0228.4c.1 Sequence Name  B0228.4c.1
Length (nt)  23420   Chromosome Location  II: 7724903-7752730
Chromosome . Primary Identifier  II Chromosome Location . Start  7724903
Chromosome Location . End  7752730 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0228.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015061 cpna-2 B0228.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0228.4c B0228.4c 23118   II: 7724903-7725349

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4c.1 7724903 7752730 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58022   447   II: 7724903-7725349 Caenorhabditis elegans
Exon58027   449   II: 7725982-7726430 Caenorhabditis elegans
Exon58030   283   II: 7726582-7726864 Caenorhabditis elegans
Exon58033   124   II: 7727066-7727189 Caenorhabditis elegans
Exon58036   453   II: 7727237-7727689 Caenorhabditis elegans
Exon58039   89   II: 7727835-7727923 Caenorhabditis elegans
Exon58042   120   II: 7727969-7728088 Caenorhabditis elegans
Exon58045   69   II: 7728134-7728202 Caenorhabditis elegans
Exon58048   69   II: 7728251-7728319 Caenorhabditis elegans
Exon58051   1536   II: 7728366-7729901 Caenorhabditis elegans
Exon58054   133   II: 7730028-7730160 Caenorhabditis elegans
Exon58056   264   II: 7730506-7730769 Caenorhabditis elegans
Exon58059   12197   II: 7731424-7743620 Caenorhabditis elegans
Exon58061   1507   II: 7744063-7745569 Caenorhabditis elegans
Exon58064   4378   II: 7746032-7750409 Caenorhabditis elegans
Exon58068   79   II: 7750463-7750541 Caenorhabditis elegans
Exon58071   101   II: 7750616-7750716 Caenorhabditis elegans
Exon58074   106   II: 7750792-7750897 Caenorhabditis elegans
Exon58077   132   II: 7751287-7751418 Caenorhabditis elegans
Exon58080   151   II: 7751472-7751622 Caenorhabditis elegans
Exon58083   75   II: 7751668-7751742 Caenorhabditis elegans
Exon58086   136   II: 7751790-7751925 Caenorhabditis elegans
Exon58089   100   II: 7751971-7752070 Caenorhabditis elegans
Exon58092   422   II: 7752309-7752730 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4c.1 7724903 7752730 1

1 Sequence

Length
23420

1 Sequence Ontology Term

Identifier Name Description
transcript