WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0228.4a.1 Sequence Name  B0228.4a.1
Length (nt)  5205   Chromosome Location  II: 7724903-7752731
Chromosome . Primary Identifier  II Chromosome Location . Start  7724903
Chromosome Location . End  7752731 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0228.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015061 cpna-2 B0228.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0228.4a B0228.4a 4902   II: 7724903-7725349

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4a.1 7724903 7752731 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58029   447   II: 7724903-7725349 Caenorhabditis elegans
Exon58033   449   II: 7725982-7726430 Caenorhabditis elegans
Exon58036   283   II: 7726582-7726864 Caenorhabditis elegans
Exon58039   124   II: 7727066-7727189 Caenorhabditis elegans
Exon58042   453   II: 7727237-7727689 Caenorhabditis elegans
Exon58045   89   II: 7727835-7727923 Caenorhabditis elegans
Exon58048   120   II: 7727969-7728088 Caenorhabditis elegans
Exon58051   69   II: 7728134-7728202 Caenorhabditis elegans
Exon58054   69   II: 7728251-7728319 Caenorhabditis elegans
Exon58057   1536   II: 7728366-7729901 Caenorhabditis elegans
Exon58060   133   II: 7730028-7730160 Caenorhabditis elegans
Exon58073   130   II: 7750280-7750409 Caenorhabditis elegans
Exon58074   79   II: 7750463-7750541 Caenorhabditis elegans
Exon58077   101   II: 7750616-7750716 Caenorhabditis elegans
Exon58080   106   II: 7750792-7750897 Caenorhabditis elegans
Exon58083   132   II: 7751287-7751418 Caenorhabditis elegans
Exon58086   151   II: 7751472-7751622 Caenorhabditis elegans
Exon58089   75   II: 7751668-7751742 Caenorhabditis elegans
Exon58092   136   II: 7751790-7751925 Caenorhabditis elegans
Exon58095   100   II: 7751971-7752070 Caenorhabditis elegans
Exon58100   423   II: 7752309-7752731 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4a.1 7724903 7752731 1

1 Sequence

Length
5205

1 Sequence Ontology Term

Identifier Name Description
transcript