WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0228.4c.1 Sequence Name  B0228.4c.1
Length (nt)  23420   Chromosome Location  II: 7724903-7752730
Chromosome . Primary Identifier  II Chromosome Location . Start  7724903
Chromosome Location . End  7752730 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0228.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015061 cpna-2 B0228.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0228.4c B0228.4c 23118   II: 7724903-7725349

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4c.1 7724903 7752730 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58027   447   II: 7724903-7725349 Caenorhabditis elegans
Exon58034   449   II: 7725982-7726430 Caenorhabditis elegans
Exon58037   283   II: 7726582-7726864 Caenorhabditis elegans
Exon58040   124   II: 7727066-7727189 Caenorhabditis elegans
Exon58043   453   II: 7727237-7727689 Caenorhabditis elegans
Exon58046   89   II: 7727835-7727923 Caenorhabditis elegans
Exon58049   120   II: 7727969-7728088 Caenorhabditis elegans
Exon58052   69   II: 7728134-7728202 Caenorhabditis elegans
Exon58055   69   II: 7728251-7728319 Caenorhabditis elegans
Exon58058   1536   II: 7728366-7729901 Caenorhabditis elegans
Exon58061   133   II: 7730028-7730160 Caenorhabditis elegans
Exon58063   264   II: 7730506-7730769 Caenorhabditis elegans
Exon58066   12197   II: 7731424-7743620 Caenorhabditis elegans
Exon58068   1507   II: 7744063-7745569 Caenorhabditis elegans
Exon58071   4378   II: 7746032-7750409 Caenorhabditis elegans
Exon58075   79   II: 7750463-7750541 Caenorhabditis elegans
Exon58078   101   II: 7750616-7750716 Caenorhabditis elegans
Exon58081   106   II: 7750792-7750897 Caenorhabditis elegans
Exon58084   132   II: 7751287-7751418 Caenorhabditis elegans
Exon58087   151   II: 7751472-7751622 Caenorhabditis elegans
Exon58090   75   II: 7751668-7751742 Caenorhabditis elegans
Exon58093   136   II: 7751790-7751925 Caenorhabditis elegans
Exon58096   100   II: 7751971-7752070 Caenorhabditis elegans
Exon58099   422   II: 7752309-7752730 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4c.1 7724903 7752730 1

1 Sequence

Length
23420

1 Sequence Ontology Term

Identifier Name Description
transcript