WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0228.4e.1 Sequence Name  B0228.4e.1
Length (nt)  8109   Chromosome Location  II: 7742397-7752428
Chromosome . Primary Identifier  II Chromosome Location . Start  7742397
Chromosome Location . End  7752428 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0228.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015061 cpna-2 B0228.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0228.4e B0228.4e 8109   II: 7742397-7743620

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4e.1 7742397 7752428 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58067   1224   II: 7742397-7743620 Caenorhabditis elegans
Exon58069   1507   II: 7744063-7745569 Caenorhabditis elegans
Exon58072   4378   II: 7746032-7750409 Caenorhabditis elegans
Exon58076   79   II: 7750463-7750541 Caenorhabditis elegans
Exon58079   101   II: 7750616-7750716 Caenorhabditis elegans
Exon58082   106   II: 7750792-7750897 Caenorhabditis elegans
Exon58085   132   II: 7751287-7751418 Caenorhabditis elegans
Exon58088   151   II: 7751472-7751622 Caenorhabditis elegans
Exon58091   75   II: 7751668-7751742 Caenorhabditis elegans
Exon58094   136   II: 7751790-7751925 Caenorhabditis elegans
Exon58097   100   II: 7751971-7752070 Caenorhabditis elegans
Exon58098   120   II: 7752309-7752428 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0228.4e.1 7742397 7752428 1

1 Sequence

Length
8109

1 Sequence Ontology Term

Identifier Name Description
transcript