WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A8.9b.1 Sequence Name  C06A8.9b.1
Length (nt)  3086   Chromosome Location  II: 7785100-7794322
Chromosome . Primary Identifier  II Chromosome Location . Start  7785100
Chromosome Location . End  7794322 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A8.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001615 glr-4 C06A8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A8.9b C06A8.9b 2634   II: 7786411-7786432

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A8.9b.1 7785100 7794322 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58253   407   II: 7785100-7785506 Caenorhabditis elegans
Exon58255   42   II: 7786391-7786432 Caenorhabditis elegans
Exon58257   95   II: 7786599-7786693 Caenorhabditis elegans
Exon58259   116   II: 7786740-7786855 Caenorhabditis elegans
Exon58261   66   II: 7786902-7786967 Caenorhabditis elegans
Exon58263   124   II: 7787087-7787210 Caenorhabditis elegans
Exon58265   172   II: 7787258-7787429 Caenorhabditis elegans
Exon58267   109   II: 7787489-7787597 Caenorhabditis elegans
Exon58269   251   II: 7787645-7787895 Caenorhabditis elegans
Exon58271   190   II: 7787942-7788131 Caenorhabditis elegans
Exon58273   106   II: 7788182-7788287 Caenorhabditis elegans
Exon58275   261   II: 7788334-7788594 Caenorhabditis elegans
Exon58279   108   II: 7791950-7792057 Caenorhabditis elegans
Exon58281   90   II: 7792850-7792939 Caenorhabditis elegans
Exon58283   66   II: 7793031-7793096 Caenorhabditis elegans
Exon58285   102   II: 7793142-7793243 Caenorhabditis elegans
Exon58287   102   II: 7793288-7793389 Caenorhabditis elegans
Exon58289   315   II: 7793441-7793755 Caenorhabditis elegans
Exon58291   101   II: 7793804-7793904 Caenorhabditis elegans
Exon58293   144   II: 7794016-7794159 Caenorhabditis elegans
Exon58295   119   II: 7794204-7794322 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A8.9b.1 7785100 7794322 -1

1 Sequence

Length
3086

1 Sequence Ontology Term

Identifier Name Description
transcript