WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A8.9a.1 Sequence Name  C06A8.9a.1
Length (nt)  3041   Chromosome Location  II: 7785100-7794319
Chromosome . Primary Identifier  II Chromosome Location . Start  7785100
Chromosome Location . End  7794319 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A8.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001615 glr-4 C06A8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A8.9a C06A8.9a 2856   II: 7785263-7785506

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A8.9a.1 7785100 7794319 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58254   407   II: 7785100-7785506 Caenorhabditis elegans
Exon58256   95   II: 7786599-7786693 Caenorhabditis elegans
Exon58258   116   II: 7786740-7786855 Caenorhabditis elegans
Exon58260   66   II: 7786902-7786967 Caenorhabditis elegans
Exon58262   124   II: 7787087-7787210 Caenorhabditis elegans
Exon58264   172   II: 7787258-7787429 Caenorhabditis elegans
Exon58266   109   II: 7787489-7787597 Caenorhabditis elegans
Exon58268   251   II: 7787645-7787895 Caenorhabditis elegans
Exon58270   190   II: 7787942-7788131 Caenorhabditis elegans
Exon58272   106   II: 7788182-7788287 Caenorhabditis elegans
Exon58274   261   II: 7788334-7788594 Caenorhabditis elegans
Exon58278   108   II: 7791950-7792057 Caenorhabditis elegans
Exon58280   90   II: 7792850-7792939 Caenorhabditis elegans
Exon58282   66   II: 7793031-7793096 Caenorhabditis elegans
Exon58284   102   II: 7793142-7793243 Caenorhabditis elegans
Exon58286   102   II: 7793288-7793389 Caenorhabditis elegans
Exon58288   315   II: 7793441-7793755 Caenorhabditis elegans
Exon58290   101   II: 7793804-7793904 Caenorhabditis elegans
Exon58292   144   II: 7794016-7794159 Caenorhabditis elegans
Exon58294   116   II: 7794204-7794319 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A8.9a.1 7785100 7794319 -1

1 Sequence

Length
3041

1 Sequence Ontology Term

Identifier Name Description
transcript