WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09A5.1b.1 Sequence Name  T09A5.1b.1
Length (nt)  1710   Chromosome Location  II: 7832842-7835140
Chromosome . Primary Identifier  II Chromosome Location . Start  7832842
Chromosome Location . End  7835140 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023408 cex-2 T09A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09A5.1b T09A5.1b 480   II: 7834072-7834199

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09A5.1b.1 7832842 7835140 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58367   1358   II: 7832842-7834199 Caenorhabditis elegans
Exon58370   112   II: 7834251-7834362 Caenorhabditis elegans
Exon58372   114   II: 7834477-7834590 Caenorhabditis elegans
Exon58374   53   II: 7834965-7835017 Caenorhabditis elegans
Exon58375   73   II: 7835068-7835140 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09A5.1b.1 7832842 7835140 -1

1 Sequence

Length
1710

1 Sequence Ontology Term

Identifier Name Description
transcript