WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T09A5.8 Sequence Name  T09A5.8
Length (nt)  1020   Chromosome Location  II: 7856079-7856140
Chromosome . Primary Identifier  II Chromosome Location . Start  7856079
Chromosome Location . End  7856140
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A5.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01089 CEC-3 37.7 339 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00052926
WBRNAi00018490
WBRNAi00113467
WBRNAi00069472
WBRNAi00035379
WBRNAi00065262
WBRNAi00007676
WBRNAi00103519
WBRNAi00117725

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T09A5.8 7856079 7856140 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011636 cec-3 T09A5.8 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T09A5.8 7856079 7856140 -1
CDS:T09A5.8 7856184 7856300 -1
CDS:T09A5.8 7856350 7856422 -1
CDS:T09A5.8 7856473 7856848 -1
CDS:T09A5.8 7856990 7857255 -1
CDS:T09A5.8 7857300 7857415 -1
CDS:T09A5.8 7857460 7857469 -1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T09A5.8.1 T09A5.8.1 1420   II: 7855810-7857600