WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK675.1a Sequence Name  ZK675.1a
Length (nt)  4227   Chromosome Location  II: 7893265-7893355
Chromosome . Primary Identifier  II Chromosome Location . Start  7893265
Chromosome Location . End  7893355
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK675.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42497 PTC-1, isoform a 155.8 1408 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00095575
WBRNAi00095834
WBRNAi00027091
WBRNAi00076939
WBRNAi00076907
WBRNAi00085829
WBRNAi00094622
WBRNAi00022120
WBRNAi00071657
WBRNAi00064999
WBRNAi00110349
WBRNAi00094623
WBRNAi00071149
WBRNAi00080606
WBRNAi00027565
WBRNAi00025168
WBRNAi00059650
WBRNAi00045246
WBRNAi00045248
WBRNAi00083401
WBRNAi00083424
WBRNAi00096845
WBRNAi00096846
WBRNAi00023390
WBRNAi00023905
WBRNAi00024190
WBRNAi00024277
WBRNAi00083384
WBRNAi00083413

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK675.1a 7893265 7893355 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004208 ptc-1 ZK675.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK675.1a 7893265 7893355 1
CDS:ZK675.1a 7893402 7893487 1
CDS:ZK675.1a 7893530 7893661 1
CDS:ZK675.1a 7895551 7895981 1
CDS:ZK675.1a 7896031 7896752 1
CDS:ZK675.1a 7896799 7898194 1
CDS:ZK675.1a 7898243 7899286 1
CDS:ZK675.1a 7899334 7899445 1
CDS:ZK675.1a 7899496 7899708 1

1 Sequence

Length
4227

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK675.1a.1 ZK675.1a.1 5052   II: 7893229-7900497