WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK669.1b.1 Sequence Name  ZK669.1b.1
Length (nt)  2766   Chromosome Location  II: 7912092-7916616
Chromosome . Primary Identifier  II Chromosome Location . Start  7912092
Chromosome Location . End  7916616 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK669.1b ZK669.1b 1641   II: 7913287-7913307

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1b.1 7912092 7916616 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58625   872   II: 7912092-7912963 Caenorhabditis elegans
Exon58629   133   II: 7913175-7913307 Caenorhabditis elegans
Exon58636   83   II: 7913998-7914080 Caenorhabditis elegans
Exon58643   150   II: 7914242-7914391 Caenorhabditis elegans
Exon58650   413   II: 7914545-7914957 Caenorhabditis elegans
Exon58657   341   II: 7915006-7915346 Caenorhabditis elegans
Exon58664   159   II: 7915394-7915552 Caenorhabditis elegans
Exon58671   304   II: 7915601-7915904 Caenorhabditis elegans
Exon58678   143   II: 7916204-7916346 Caenorhabditis elegans
Exon58683   168   II: 7916449-7916616 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1b.1 7912092 7916616 -1

1 Sequence

Length
2766

1 Sequence Ontology Term

Identifier Name Description
transcript