WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK669.1e.1 Sequence Name  ZK669.1e.1
Length (nt)  2556   Chromosome Location  II: 7913287-7927301
Chromosome . Primary Identifier  II Chromosome Location . Start  7913287
Chromosome Location . End  7927301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK669.1e ZK669.1e 2556   II: 7913287-7913307

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1e.1 7913287 7927301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58632   21   II: 7913287-7913307 Caenorhabditis elegans
Exon58640   83   II: 7913998-7914080 Caenorhabditis elegans
Exon58647   150   II: 7914242-7914391 Caenorhabditis elegans
Exon58654   413   II: 7914545-7914957 Caenorhabditis elegans
Exon58661   341   II: 7915006-7915346 Caenorhabditis elegans
Exon58668   159   II: 7915394-7915552 Caenorhabditis elegans
Exon58675   304   II: 7915601-7915904 Caenorhabditis elegans
Exon58681   143   II: 7916204-7916346 Caenorhabditis elegans
Exon58687   81   II: 7917013-7917093 Caenorhabditis elegans
Exon58692   78   II: 7924191-7924268 Caenorhabditis elegans
Exon58696   180   II: 7924713-7924892 Caenorhabditis elegans
Exon58700   189   II: 7924937-7925125 Caenorhabditis elegans
Exon58704   203   II: 7925172-7925374 Caenorhabditis elegans
Exon58708   106   II: 7925538-7925643 Caenorhabditis elegans
Exon58712   73   II: 7926516-7926588 Caenorhabditis elegans
Exon58713   32   II: 7927270-7927301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1e.1 7913287 7927301 -1

1 Sequence

Length
2556

1 Sequence Ontology Term

Identifier Name Description
transcript