WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK669.1c.1 Sequence Name  ZK669.1c.1
Length (nt)  2709   Chromosome Location  II: 7913287-7928133
Chromosome . Primary Identifier  II Chromosome Location . Start  7913287
Chromosome Location . End  7928133 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK669.1c ZK669.1c 2709   II: 7913287-7913307

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1c.1 7913287 7928133 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58633   21   II: 7913287-7913307 Caenorhabditis elegans
Exon58637   83   II: 7913998-7914080 Caenorhabditis elegans
Exon58644   150   II: 7914242-7914391 Caenorhabditis elegans
Exon58651   413   II: 7914545-7914957 Caenorhabditis elegans
Exon58658   341   II: 7915006-7915346 Caenorhabditis elegans
Exon58665   159   II: 7915394-7915552 Caenorhabditis elegans
Exon58672   304   II: 7915601-7915904 Caenorhabditis elegans
Exon58679   143   II: 7916204-7916346 Caenorhabditis elegans
Exon58686   81   II: 7917013-7917093 Caenorhabditis elegans
Exon58691   78   II: 7924191-7924268 Caenorhabditis elegans
Exon58695   180   II: 7924713-7924892 Caenorhabditis elegans
Exon58699   189   II: 7924937-7925125 Caenorhabditis elegans
Exon58703   203   II: 7925172-7925374 Caenorhabditis elegans
Exon58707   106   II: 7925538-7925643 Caenorhabditis elegans
Exon58711   73   II: 7926516-7926588 Caenorhabditis elegans
Exon58716   88   II: 7927458-7927545 Caenorhabditis elegans
Exon58717   97   II: 7928037-7928133 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1c.1 7913287 7928133 -1

1 Sequence

Length
2709

1 Sequence Ontology Term

Identifier Name Description
transcript