WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DH11.5d.1 Sequence Name  DH11.5d.1
Length (nt)  3223   Chromosome Location  II: 7976608-7994665
Chromosome . Primary Identifier  II Chromosome Location . Start  7976608
Chromosome Location . End  7994665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DH11.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008438 DH11.5 DH11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DH11.5d DH11.5d 2478   II: 7976669-7977041

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DH11.5d.1 7976608 7994665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58763   434   II: 7976608-7977041 Caenorhabditis elegans
Exon58768   69   II: 7985640-7985708 Caenorhabditis elegans
Exon58771   156   II: 7986092-7986247 Caenorhabditis elegans
Exon58774   82   II: 7986656-7986737 Caenorhabditis elegans
Exon58777   86   II: 7987196-7987281 Caenorhabditis elegans
Exon58780   189   II: 7987353-7987541 Caenorhabditis elegans
Exon58783   150   II: 7987590-7987739 Caenorhabditis elegans
Exon58784   70   II: 7987789-7987858 Caenorhabditis elegans
Exon58788   57   II: 7988477-7988533 Caenorhabditis elegans
Exon58789   80   II: 7988585-7988664 Caenorhabditis elegans
Exon58790   82   II: 7989456-7989537 Caenorhabditis elegans
Exon58791   115   II: 7989994-7990108 Caenorhabditis elegans
Exon58793   84   II: 7992817-7992900 Caenorhabditis elegans
Exon58795   303   II: 7992953-7993255 Caenorhabditis elegans
Exon58797   299   II: 7993304-7993602 Caenorhabditis elegans
Exon58799   130   II: 7993655-7993784 Caenorhabditis elegans
Exon58802   837   II: 7993829-7994665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DH11.5d.1 7976608 7994665 1

1 Sequence

Length
3223

1 Sequence Ontology Term

Identifier Name Description
transcript