WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:DH11.3 Sequence Name  DH11.3
Length (nt)  3726   Chromosome Location  II: 7995705-7995813
Chromosome . Primary Identifier  II Chromosome Location . Start  7995705
Chromosome Location . End  7995813
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DH11.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53819 PGP-11 137.2 1241 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00043545
WBRNAi00012620
WBRNAi00077360

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:DH11.3 7995705 7995813 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004005 pgp-11 DH11.3 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:DH11.3 7995705 7995813 -1
CDS:DH11.3 7995862 7996097 -1
CDS:DH11.3 7996259 7996459 -1
CDS:DH11.3 7996508 7996981 -1
CDS:DH11.3 7997032 7997346 -1
CDS:DH11.3 7997444 7997605 -1
CDS:DH11.3 7997652 7997744 -1
CDS:DH11.3 7997791 7998285 -1
CDS:DH11.3 7998341 7998814 -1
CDS:DH11.3 7998861 7999146 -1
CDS:DH11.3 7999255 7999373 -1
CDS:DH11.3 7999421 7999543 -1
CDS:DH11.3 7999610 7999781 -1
CDS:DH11.3 7999829 8000058 -1
CDS:DH11.3 8000107 8000241 -1
CDS:DH11.3 8000289 8000390 -1

1 Sequence

Length
3726

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:DH11.3.2 DH11.3.2 3930   II: 7995580-8000469
Transcript:DH11.3.1 DH11.3.1 3980   II: 7995580-8004257