WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B11.1.1 Sequence Name  C08B11.1.1
Length (nt)  2816   Chromosome Location  II: 8017680-8020785
Chromosome . Primary Identifier  II Chromosome Location . Start  8017680
Chromosome Location . End  8020785 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006996 zyg-11 C08B11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B11.1 C08B11.1 2400   II: 8017692-8017788

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B11.1.1 8017680 8020785 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58889   109   II: 8017680-8017788 Caenorhabditis elegans
Exon58890   237   II: 8017832-8018068 Caenorhabditis elegans
Exon58891   621   II: 8018112-8018732 Caenorhabditis elegans
Exon58892   295   II: 8018785-8019079 Caenorhabditis elegans
Exon58893   630   II: 8019129-8019758 Caenorhabditis elegans
Exon58894   339   II: 8019805-8020143 Caenorhabditis elegans
Exon58895   585   II: 8020201-8020785 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B11.1.1 8017680 8020785 1

1 Sequence

Length
2816

1 Sequence Ontology Term

Identifier Name Description
transcript