WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B11.5.1 Sequence Name  C08B11.5.1
Length (nt)  1311   Chromosome Location  II: 8034335-8035767
Chromosome . Primary Identifier  II Chromosome Location . Start  8034335
Chromosome Location . End  8035767 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004723 sap-49 C08B11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B11.5 C08B11.5 1167   II: 8034479-8034620

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B11.5.1 8034335 8035767 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58931   286   II: 8034335-8034620 Caenorhabditis elegans
Exon58932   770   II: 8034694-8035463 Caenorhabditis elegans
Exon58933   255   II: 8035513-8035767 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B11.5.1 8034335 8035767 -1

1 Sequence

Length
1311

1 Sequence Ontology Term

Identifier Name Description
transcript