WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05H10.1.1 Sequence Name  T05H10.1.1
Length (nt)  4406   Chromosome Location  II: 8042589-8047452
Chromosome . Primary Identifier  II Chromosome Location . Start  8042589
Chromosome Location . End  8047452 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011507 T05H10.1 T05H10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H10.1 T05H10.1 3981   II: 8042589-8042867

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05H10.1.1 8042589 8047452 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58959   279   II: 8042589-8042867 Caenorhabditis elegans
Exon58960   862   II: 8042914-8043775 Caenorhabditis elegans
Exon58961   281   II: 8043823-8044103 Caenorhabditis elegans
Exon58962   807   II: 8044148-8044954 Caenorhabditis elegans
Exon58963   324   II: 8045002-8045325 Caenorhabditis elegans
Exon58964   824   II: 8045435-8046258 Caenorhabditis elegans
Exon58965   310   II: 8046301-8046610 Caenorhabditis elegans
Exon58966   65   II: 8046654-8046718 Caenorhabditis elegans
Exon58967   654   II: 8046799-8047452 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05H10.1.1 8042589 8047452 1

1 Sequence

Length
4406

1 Sequence Ontology Term

Identifier Name Description
transcript