WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05H10.2.1 Sequence Name  T05H10.2.1
Length (nt)  1237   Chromosome Location  II: 8047564-8049063
Chromosome . Primary Identifier  II Chromosome Location . Start  8047564
Chromosome Location . End  8049063 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000151 apn-1 T05H10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H10.2 T05H10.2 1191   II: 8047564-8047708

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05H10.2.1 8047564 8049063 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58968   145   II: 8047564-8047708 Caenorhabditis elegans
Exon58969   630   II: 8047921-8048550 Caenorhabditis elegans
Exon58970   462   II: 8048602-8049063 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05H10.2.1 8047564 8049063 1

1 Sequence

Length
1237

1 Sequence Ontology Term

Identifier Name Description
transcript