WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05H10.8.1 Sequence Name  T05H10.8.1
Length (nt)  1423   Chromosome Location  II: 8059069-8061753
Chromosome . Primary Identifier  II Chromosome Location . Start  8059069
Chromosome Location . End  8061753 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011512 T05H10.8 T05H10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H10.8 T05H10.8 1134   II: 8059069-8059110

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05H10.8.1 8059069 8061753 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58981   42   II: 8059069-8059110 Caenorhabditis elegans
Exon58982   117   II: 8059156-8059272 Caenorhabditis elegans
Exon58983   169   II: 8059373-8059541 Caenorhabditis elegans
Exon58984   123   II: 8060174-8060296 Caenorhabditis elegans
Exon58985   88   II: 8060345-8060432 Caenorhabditis elegans
Exon58986   250   II: 8060476-8060725 Caenorhabditis elegans
Exon58987   204   II: 8061076-8061279 Caenorhabditis elegans
Exon58988   430   II: 8061324-8061753 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05H10.8.1 8059069 8061753 1

1 Sequence

Length
1423

1 Sequence Ontology Term

Identifier Name Description
transcript