WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05H10.7b.1 Sequence Name  T05H10.7b.1
Length (nt)  2287   Chromosome Location  II: 8068108-8070688
Chromosome . Primary Identifier  II Chromosome Location . Start  8068108
Chromosome Location . End  8070688 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H10.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011511 gpcp-2 T05H10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H10.7b T05H10.7b 2160   II: 8068233-8068295

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05H10.7b.1 8068108 8070688 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59022   188   II: 8068108-8068295 Caenorhabditis elegans
Exon59024   384   II: 8068344-8068727 Caenorhabditis elegans
Exon59026   267   II: 8068776-8069042 Caenorhabditis elegans
Exon59028   930   II: 8069091-8070020 Caenorhabditis elegans
Exon59030   260   II: 8070072-8070331 Caenorhabditis elegans
Exon59032   104   II: 8070378-8070481 Caenorhabditis elegans
Exon59034   154   II: 8070535-8070688 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05H10.7b.1 8068108 8070688 -1

1 Sequence

Length
2287

1 Sequence Ontology Term

Identifier Name Description
transcript