WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02C4.3c.1 Sequence Name  K02C4.3c.1
Length (nt)  4225   Chromosome Location  II: 8080783-8086853
Chromosome . Primary Identifier  II Chromosome Location . Start  8080783
Chromosome Location . End  8086853 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02C4.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010502 K02C4.3 K02C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02C4.3c K02C4.3c 3780   II: 8081222-8081320

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02C4.3c.1 8080783 8086853 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59047   538   II: 8080783-8081320 Caenorhabditis elegans
Exon59053   207   II: 8081833-8082039 Caenorhabditis elegans
Exon59060   343   II: 8082098-8082440 Caenorhabditis elegans
Exon59065   335   II: 8082743-8083077 Caenorhabditis elegans
Exon59069   64   II: 8083629-8083692 Caenorhabditis elegans
Exon59073   637   II: 8083739-8084375 Caenorhabditis elegans
Exon59077   353   II: 8084536-8084888 Caenorhabditis elegans
Exon59081   445   II: 8084934-8085378 Caenorhabditis elegans
Exon59085   553   II: 8085427-8085979 Caenorhabditis elegans
Exon59089   585   II: 8086049-8086633 Caenorhabditis elegans
Exon59094   165   II: 8086689-8086853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02C4.3c.1 8080783 8086853 -1

1 Sequence

Length
4225

1 Sequence Ontology Term

Identifier Name Description
transcript