WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02C4.3a.1 Sequence Name  K02C4.3a.1
Length (nt)  4223   Chromosome Location  II: 8080785-8086847
Chromosome . Primary Identifier  II Chromosome Location . Start  8080785
Chromosome Location . End  8086847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02C4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010502 K02C4.3 K02C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02C4.3a K02C4.3a 3786   II: 8081222-8081320

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02C4.3a.1 8080785 8086847 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59048   536   II: 8080785-8081320 Caenorhabditis elegans
Exon59054   213   II: 8081833-8082045 Caenorhabditis elegans
Exon59059   343   II: 8082098-8082440 Caenorhabditis elegans
Exon59063   335   II: 8082743-8083077 Caenorhabditis elegans
Exon59067   64   II: 8083629-8083692 Caenorhabditis elegans
Exon59071   637   II: 8083739-8084375 Caenorhabditis elegans
Exon59075   353   II: 8084536-8084888 Caenorhabditis elegans
Exon59079   445   II: 8084934-8085378 Caenorhabditis elegans
Exon59083   553   II: 8085427-8085979 Caenorhabditis elegans
Exon59087   585   II: 8086049-8086633 Caenorhabditis elegans
Exon59091   159   II: 8086689-8086847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02C4.3a.1 8080785 8086847 -1

1 Sequence

Length
4223

1 Sequence Ontology Term

Identifier Name Description
transcript