WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K02C4.4a Sequence Name  K02C4.4a
Length (nt)  2172   Chromosome Location  II: 8088790-8088927
Chromosome . Primary Identifier  II Chromosome Location . Start  8088790
Chromosome Location . End  8088927
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02C4.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32687 LTD-1, isoform a 83.1 723 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00001907
WBRNAi00049683
WBRNAi00016442
WBRNAi00109791
WBRNAi00109650
WBRNAi00109697
WBRNAi00103428
WBRNAi00092921
WBRNAi00109744

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K02C4.4a 8088790 8088927 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003089 ltd-1 K02C4.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:K02C4.4a 8088790 8088927 -1
CDS:K02C4.4a 8089371 8089631 -1
CDS:K02C4.4a 8090118 8090246 -1
CDS:K02C4.4a 8090292 8090447 -1
CDS:K02C4.4a 8090500 8090743 -1
CDS:K02C4.4a 8090812 8090976 -1
CDS:K02C4.4a 8091021 8091271 -1
CDS:K02C4.4a 8091319 8091495 -1
CDS:K02C4.4a 8091856 8092213 -1
CDS:K02C4.4a 8092269 8092467 -1
CDS:K02C4.4a 8092596 8092689 -1

1 Sequence

Length
2172

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K02C4.4a.1 K02C4.4a.1 2600   II: 8088427-8092754