WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41C4.5e.1 Sequence Name  C41C4.5e.1
Length (nt)  3156   Chromosome Location  II: 8116459-8122914
Chromosome . Primary Identifier  II Chromosome Location . Start  8116459
Chromosome Location . End  8122914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41C4.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006832 unc-105 C41C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.5e C41C4.5e 2925   II: 8116486-8116636

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5e.1 8116459 8122914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59163   178   II: 8116459-8116636 Caenorhabditis elegans
Exon59170   150   II: 8116826-8116975 Caenorhabditis elegans
Exon59181   121   II: 8119008-8119128 Caenorhabditis elegans
Exon59188   103   II: 8119179-8119281 Caenorhabditis elegans
Exon59195   190   II: 8119329-8119518 Caenorhabditis elegans
Exon59202   249   II: 8119752-8120000 Caenorhabditis elegans
Exon59209   472   II: 8120047-8120518 Caenorhabditis elegans
Exon59216   262   II: 8120568-8120829 Caenorhabditis elegans
Exon59223   323   II: 8120888-8121210 Caenorhabditis elegans
Exon59230   309   II: 8121254-8121562 Caenorhabditis elegans
Exon59237   202   II: 8121773-8121974 Caenorhabditis elegans
Exon59244   182   II: 8122020-8122201 Caenorhabditis elegans
Exon59246   90   II: 8122253-8122342 Caenorhabditis elegans
Exon59257   325   II: 8122590-8122914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5e.1 8116459 8122914 1

1 Sequence

Length
3156

1 Sequence Ontology Term

Identifier Name Description
transcript