WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41C4.5c.2 Sequence Name  C41C4.5c.2
Length (nt)  2764   Chromosome Location  II: 8116463-8122346
Chromosome . Primary Identifier  II Chromosome Location . Start  8116463
Chromosome Location . End  8122346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41C4.5c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006832 unc-105 C41C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.5c C41C4.5c 2490   II: 8119025-8119128

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5c.2 8116463 8122346 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59164   33   II: 8116463-8116495 Caenorhabditis elegans
Exon59174   39   II: 8118329-8118367 Caenorhabditis elegans
Exon59175   185   II: 8118767-8118951 Caenorhabditis elegans
Exon59179   121   II: 8119008-8119128 Caenorhabditis elegans
Exon59186   103   II: 8119179-8119281 Caenorhabditis elegans
Exon59193   190   II: 8119329-8119518 Caenorhabditis elegans
Exon59200   249   II: 8119752-8120000 Caenorhabditis elegans
Exon59207   472   II: 8120047-8120518 Caenorhabditis elegans
Exon59214   262   II: 8120568-8120829 Caenorhabditis elegans
Exon59221   323   II: 8120888-8121210 Caenorhabditis elegans
Exon59228   309   II: 8121254-8121562 Caenorhabditis elegans
Exon59235   202   II: 8121773-8121974 Caenorhabditis elegans
Exon59242   182   II: 8122020-8122201 Caenorhabditis elegans
Exon59248   94   II: 8122253-8122346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5c.2 8116463 8122346 1

1 Sequence

Length
2764

1 Sequence Ontology Term

Identifier Name Description
transcript