WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41C4.5c.1 Sequence Name  C41C4.5c.1
Length (nt)  3181   Chromosome Location  II: 8116465-8122905
Chromosome . Primary Identifier  II Chromosome Location . Start  8116465
Chromosome Location . End  8122905 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41C4.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006832 unc-105 C41C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.5c C41C4.5c 2490   II: 8119025-8119128

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5c.1 8116465 8122905 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59166   172   II: 8116465-8116636 Caenorhabditis elegans
Exon59168   150   II: 8116826-8116975 Caenorhabditis elegans
Exon59178   121   II: 8119008-8119128 Caenorhabditis elegans
Exon59185   103   II: 8119179-8119281 Caenorhabditis elegans
Exon59192   190   II: 8119329-8119518 Caenorhabditis elegans
Exon59199   249   II: 8119752-8120000 Caenorhabditis elegans
Exon59206   472   II: 8120047-8120518 Caenorhabditis elegans
Exon59213   262   II: 8120568-8120829 Caenorhabditis elegans
Exon59220   323   II: 8120888-8121210 Caenorhabditis elegans
Exon59227   309   II: 8121254-8121562 Caenorhabditis elegans
Exon59234   202   II: 8121773-8121974 Caenorhabditis elegans
Exon59241   182   II: 8122020-8122201 Caenorhabditis elegans
Exon59252   130   II: 8122253-8122382 Caenorhabditis elegans
Exon59254   316   II: 8122590-8122905 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5c.1 8116465 8122905 1

1 Sequence

Length
3181

1 Sequence Ontology Term

Identifier Name Description
transcript