WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C41C4.7b Sequence Name  C41C4.7b
Length (nt)  1125   Chromosome Location  II: 8135144-8135179
Chromosome . Primary Identifier  II Chromosome Location . Start  8135144
Chromosome Location . End  8135179
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41C4.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32325 CTNS-1, isoform b 42.2 374 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00042282
WBRNAi00011834
WBRNAi00029719
WBRNAi00062157

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C41C4.7b 8135144 8135179 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008052 ctns-1 C41C4.7 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C41C4.7b 8135144 8135179 -1
CDS:C41C4.7b 8135246 8135476 -1
CDS:C41C4.7b 8135862 8136152 -1
CDS:C41C4.7b 8136200 8136440 -1
CDS:C41C4.7b 8136491 8136682 -1
CDS:C41C4.7b 8136774 8136907 -1

1 Sequence

Length
1125

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C41C4.7b.1 C41C4.7b.1 1398   II: 8134756-8136918