WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10B5.3.1 Sequence Name  F10B5.3.1
Length (nt)  1610   Chromosome Location  II: 8147184-8150030
Chromosome . Primary Identifier  II Chromosome Location . Start  8147184
Chromosome Location . End  8150030 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10B5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008640 btbz-2 F10B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10B5.3 F10B5.3 1416   II: 8147363-8147693

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10B5.3.1 8147184 8150030 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59305   510   II: 8147184-8147693 Caenorhabditis elegans
Exon59306   130   II: 8148360-8148489 Caenorhabditis elegans
Exon59307   613   II: 8148536-8149148 Caenorhabditis elegans
Exon59308   236   II: 8149630-8149865 Caenorhabditis elegans
Exon59309   121   II: 8149910-8150030 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10B5.3.1 8147184 8150030 -1

1 Sequence

Length
1610

1 Sequence Ontology Term

Identifier Name Description
transcript