WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10B5.4.1 Sequence Name  F10B5.4.1
Length (nt)  1964   Chromosome Location  II: 8154096-8156945
Chromosome . Primary Identifier  II Chromosome Location . Start  8154096
Chromosome Location . End  8156945 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10B5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006655 tub-1 F10B5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10B5.4 F10B5.4 1281   II: 8154771-8154988

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10B5.4.1 8154096 8156945 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59310   893   II: 8154096-8154988 Caenorhabditis elegans
Exon59311   202   II: 8155034-8155235 Caenorhabditis elegans
Exon59312   355   II: 8155279-8155633 Caenorhabditis elegans
Exon59313   198   II: 8155682-8155879 Caenorhabditis elegans
Exon59314   171   II: 8156016-8156186 Caenorhabditis elegans
Exon59315   145   II: 8156801-8156945 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10B5.4.1 8154096 8156945 -1

1 Sequence

Length
1964

1 Sequence Ontology Term

Identifier Name Description
transcript