WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10B5.6.1 Sequence Name  F10B5.6.1
Length (nt)  2033   Chromosome Location  II: 8159865-8162170
Chromosome . Primary Identifier  II Chromosome Location . Start  8159865
Chromosome Location . End  8162170 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10B5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001281 emb-27 F10B5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10B5.6 F10B5.6 1968   II: 8159929-8160138

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10B5.6.1 8159865 8162170 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59331   274   II: 8159865-8160138 Caenorhabditis elegans
Exon59332   295   II: 8160183-8160477 Caenorhabditis elegans
Exon59333   367   II: 8160528-8160894 Caenorhabditis elegans
Exon59334   400   II: 8160938-8161337 Caenorhabditis elegans
Exon59335   505   II: 8161384-8161888 Caenorhabditis elegans
Exon59336   105   II: 8161933-8162037 Caenorhabditis elegans
Exon59337   87   II: 8162084-8162170 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10B5.6.1 8159865 8162170 -1

1 Sequence

Length
2033

1 Sequence Ontology Term

Identifier Name Description
transcript