WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05C12.2.1 Sequence Name  T05C12.2.1
Length (nt)  1503   Chromosome Location  II: 8174937-8177195
Chromosome . Primary Identifier  II Chromosome Location . Start  8174937
Chromosome Location . End  8177195 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000053 acr-14 T05C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C12.2 T05C12.2 1503   II: 8174937-8175059

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05C12.2.1 8174937 8177195 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59373   123   II: 8174937-8175059 Caenorhabditis elegans
Exon59374   113   II: 8175104-8175216 Caenorhabditis elegans
Exon59375   193   II: 8175312-8175504 Caenorhabditis elegans
Exon59376   197   II: 8175548-8175744 Caenorhabditis elegans
Exon59377   180   II: 8175793-8175972 Caenorhabditis elegans
Exon59378   132   II: 8176031-8176162 Caenorhabditis elegans
Exon59379   112   II: 8176205-8176316 Caenorhabditis elegans
Exon59380   103   II: 8176361-8176463 Caenorhabditis elegans
Exon59381   55   II: 8176509-8176563 Caenorhabditis elegans
Exon59382   70   II: 8176668-8176737 Caenorhabditis elegans
Exon59383   135   II: 8176781-8176915 Caenorhabditis elegans
Exon59384   90   II: 8177106-8177195 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05C12.2.1 8174937 8177195 -1

1 Sequence

Length
1503

1 Sequence Ontology Term

Identifier Name Description
transcript