WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M110.4a.1 Sequence Name  M110.4a.1
Length (nt)  4517   Chromosome Location  II: 8217231-8222265
Chromosome . Primary Identifier  II Chromosome Location . Start  8217231
Chromosome Location . End  8222265 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M110.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002066 ifg-1 M110.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M110.4a M110.4a 3471   II: 8217254-8217302

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M110.4a.1 8217231 8222265 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59483   72   II: 8217231-8217302 Caenorhabditis elegans
Exon59489   82   II: 8217357-8217438 Caenorhabditis elegans
Exon59491   117   II: 8217483-8217599 Caenorhabditis elegans
Exon59498   1093   II: 8217745-8218837 Caenorhabditis elegans
Exon59501   204   II: 8218892-8219095 Caenorhabditis elegans
Exon59506   967   II: 8219147-8220113 Caenorhabditis elegans
Exon59511   571   II: 8220167-8220737 Caenorhabditis elegans
Exon59516   226   II: 8220784-8221009 Caenorhabditis elegans
Exon59522   1185   II: 8221081-8222265 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M110.4a.1 8217231 8222265 1

1 Sequence

Length
4517

1 Sequence Ontology Term

Identifier Name Description
transcript