WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M110.5a.2 Sequence Name  M110.5a.2
Length (nt)  2105   Chromosome Location  II: 8222386-8229153
Chromosome . Primary Identifier  II Chromosome Location . Start  8222386
Chromosome Location . End  8229153 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M110.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000894 dab-1 M110.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M110.5a M110.5a 1473   II: 8226330-8226438

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M110.5a.2 8222386 8229153 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59528   90   II: 8222386-8222475 Caenorhabditis elegans
Exon59532   123   II: 8226316-8226438 Caenorhabditis elegans
Exon59542   56   II: 8226948-8227003 Caenorhabditis elegans
Exon59553   420   II: 8227057-8227476 Caenorhabditis elegans
Exon59570   635   II: 8227559-8228193 Caenorhabditis elegans
Exon59580   142   II: 8228245-8228386 Caenorhabditis elegans
Exon59595   639   II: 8228515-8229153 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M110.5a.2 8222386 8229153 1

1 Sequence

Length
2105

1 Sequence Ontology Term

Identifier Name Description
transcript