WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M110.5e.2 Sequence Name  M110.5e.2
Length (nt)  2027   Chromosome Location  II: 8226314-8229151
Chromosome . Primary Identifier  II Chromosome Location . Start  8226314
Chromosome Location . End  8229151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M110.5e.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000894 dab-1 M110.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M110.5e M110.5e 1485   II: 8226330-8226438

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M110.5e.2 8226314 8229151 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59531   125   II: 8226314-8226438 Caenorhabditis elegans
Exon59548   56   II: 8226948-8227003 Caenorhabditis elegans
Exon59559   420   II: 8227057-8227476 Caenorhabditis elegans
Exon59566   641   II: 8227553-8228193 Caenorhabditis elegans
Exon59576   148   II: 8228239-8228386 Caenorhabditis elegans
Exon59592   637   II: 8228515-8229151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M110.5e.2 8226314 8229151 1

1 Sequence

Length
2027

1 Sequence Ontology Term

Identifier Name Description
transcript